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Data can fight drug resistance

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Flu season is once again here and many South Africans will be turning to their trusted dose of antibiotics to resolve the outbreak as effectively as possible.  Despite this ongoing routine, South Africa is facing a huge problem.

A study led by Julia Gasson of the Western Cape Department of Health has revealed that local clinics are ignoring the guidelines on prescribing those antibiotics, and formal procedures are followed only 45% of the time.

Another global study, by the Center for Disease Dynamics, Economics & Policy (CDDEP), Princeton University, ETH Zurich and the University of Antwerp, analysed human antibiotic consumption in 76 countries and found it has increased worldwide from 11.3 to 15.7 defined daily doses (DDDs) per 1,000 inhabitants per day between 2000 and 2015.

The results of these actions are far-reaching. Antibiotics have begun to lose their effectiveness and we are developing a resistance to them. And the problem is more complicated than we had first thought. In one case, it was found that antibiotic resistant patients with infections such as E. coli and Klebsiella pneumonia had contracted a specific gene that had its origins on Chinese pig farms.

A crucial step in combatting antibiotic resistance lies in technological evolution

As a solution, scientists are now looking towards the field of bacterial genomics to tackle the global issue of antibiotic resistance. Genomics refers to the branch of molecular biology concerned with the structure, function, evolution, and mapping of our genes. This process can provide clarity around resistance mechanisms and even the evolution of various strains of disease. Today the process of genomics has also  become highly automated, which has been greatly accelerated through a combination of parallel processing and the advancement in data management processes.

Due these advancements, we are now entering a world of personalised medicine, whereby individual patients can be sequenced and comparative genomic analysis can provide vital information around the progression of resistant strains of disease. Within this context, technology plays a pivotal role in allowing bioinformaticians to work with and transfer data to clinicians in an efficient and timely manner.

NetApp is assisting to achieve this through our ONTAP Cloud storage software, which allows for the protection of genomic data whilst adding the flexibility to simplify the use of public cloud. We are currently seeing this process in action through our work with PetaGene – a team which originated from Cambridge University PHDs who required a novel approach to the problem of storing data associated genomics. Additionally, we are deploying the new and improved NetApp StorageGRID which now automates tamper proof retention of critical personal data. With an increased focus on data analytics, StorageGRID customers retain and manage an unlimited amount of rich media, which is particularly useful for the field of genomics.

The key benefits of applying technology to scientific research

Unlike generic data reduction techniques, there are a few key benefits of applying the process of data management to the pursuit of tackling antibiotic resistance:

o   Increased collaborative efficiency, with smaller more portable files transferable over the NetApp data fabric

o   Use less storage capacity and lower costs

o   Leverage the flexibility of the cloud. With the NetApp data fabric, files can be seamlessly and securely moved to and from the cloud

o   Maintain interoperability with existing workflows and formats

The field of genomics, underpinned by efficient data management, is the way forward in combatting the global issue of antibiotic resistance. This of course needs to be coupled with the necessary behavioural changes where prescription guidelines are followed to the tee. Within South Africa, a country marred by drug resistant infectious diseases ranging from HIV through to malaria, the need to simplify collaboration in genomics with improved data management has never been more crucial.

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Appdate: No wallet? No problem?

In his app roundup, SEAN BACHER highlights VodaPay Masterpass, Charge Running, South African App Integrator Directory, uKheshe Health and LocTransie.

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VodaPay Masterpass

Digital mobility is now a way of life and most are using smartphones to pay bills. 

To meet this need Vodacom and Mastercard have launched VodaPay Masterpass, which enables Vodacom customers to load any bank card into a secure digital wallet, downloaded as an app on their smartphone. Once loaded, these cards and the secure credentials associated with them are safely stored, enabling customers to start transacting immediately without the hassle of entering card details each time they make a purchase.

Vodacom customers can buy prepaid data, airtime and SMS, or voice bundles, directly through the app. They can also select the Pay Bills menu option to settle their DStv accounts, pay a utility bill or take care of a traffic fine.

With the app’s Scan to Pay functionality, users can scan a QR code to pay for goods and services wherever Masterpass is accepted, including all SnapScan and Zapper merchants. Once a QR code is scanned, users select the card they wish to use, and enter their bank PIN number on their own device to complete the transaction.

Platform: Android and iOS

Expect to pay: A free download and users will not be charged for any transaction fees.

Stockists:  Download VodaPay Masterpass for iOS here and for Android here.

Charge Running

Most running apps track data like pace and distance and, in some cases play audio designed to motivate you, but don’t give you the push you get when you run with a friend. Charge Running is an app that lets you run alongside other runners, virtually, as well as giving live coaching to help you go the distance.

The app includes features such as:

·       Unlimited access to live running classes and virtual races  

·       The ability to compete with runners anywhere in the world in real-time

·       A live leaderboard that shows where you are in the pack to keep you pushing

·       Live, personalised feedback from professional trainers 

·       Group chats with coaches and fellow runners throughout the run

·       On-demand runs for times when you can’t join the live groups 

·       A choice of difficulty levels and race types 

Platform: Android and iOS

Expect to pay: A free seven-day trial; thereafter R150 per month

Stockists: Visit the Charge Running site here for downloading instructions.

South African App Integrator Directory

The South African App Integrator Directory from Xero is designed to solve the complexity of choosing apps for small business owners.

The directory is now available in South Africa with six partners, including Realm Digital, Radical Cloud Solutions, Nimacc, Insights, Iridium Business Solutions and Creative CFO. According to Xero, these are all organisations with a proven track record of successfully integrating marketplace apps into Xero businesses. There are also currently over 700 apps in Xero’s App Marketplace worldwide, 21 of which are South African born.

As small businesses become more tech-savvy, they need to know exactly which apps to install on their devices and how the apps will help them. They also need to be able to install these apps from a trusted integrator so they know for what they are paying. 

Platform: Any device with an up-to-date Internet browser.

Expect to pay: A one month trial version is offered, after which the App Integrator ranges from R125 to R245 per month, depending on the company’s needs.

Stockists: Visit Xero here for downloading instructions.

Click here to read about uKheshe Health and LocTransie.

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Prize offered for drone films

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DJI and SkyPixel, the world’s most popular aerial photography community, have announced the first short film contest inviting users to submit cinematic stories shot with camera and gimbal products. The 2019 SkyPixel Short Film Contest will accept entries until 14 October 2019. It welcomes submissions from all creators, ranging from hobbyists to social media users and professional videographers. around the globe.

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The 2019 SkyPixel Short Film Contest consists of three storytelling categories—‘Big Moments Start Small,’ ‘Make Your Move’ and ‘Adventure Starts With You.’ There is no restriction on the type or brand of equipment participants use, and they can submit as many videos as they wish.

A total of 100 winners can win a range of prizes totaling $48,600 USD in categories including Recommended Films, Best Editing, Best Story, Nominated Entries, People’s Choice Prize as well as This Week’s Most Popular, sponsored by the partner SanDisk and WD brand from Western Digital Corp. This year’s Best Short Video winners will each receive the new Ronin-SC Pro Combo, Osmo Action as well as WD 2TB My Passport Wireless SSD.

Winning entries will also be showcased on the SkyPixel website as well as to DJI’s millions of fans and followers across its social media platforms.

“DJI has redefined how people capture stable video for all of life’s moments. The compact size, portability and powerful imaging system of our Osmo and Ronin series have also made it possible for anyone to take their creativity and inspirations to the next level,” said Basile David, Director of Brand and Content Partnerships at DJI. “With this contest, we hope to encourage more people to embrace and share their own creative way of storytelling.”

Since 2014, the SkyPixel online community has attracted 16 million professional aerial photographers and content creators from more than 140 countries, growing into the largest aerial photography community today. Over the past five years, SkyPixel has received over 150,000 submissions, becoming a go-to platform for original aerial masterpieces and extraordinary footage powered by other gimbal products focusing on various themes.

Details of the 2019 SkyPixel Short Film Contest

The short film contest consists of three categories:

Big Moments Start Small: Create a video showcasing the small, lightweight design of your camera device and your best cinematic scenes. Users are recommended to include at least 10 seconds of behind-the-scenes clips of their product such as DJI Osmo Pocket or other devices.

Make Your Move: Create a video showcasing the stabilized footage from your device. Users are recommended to include at least 10 seconds of behind-the-scenes clips of their product such as DJI Osmo Series or other devices.

Adventure Starts With You: Create a short, cinematic narrative film to showcase your creative skills and visual effects. Users are recommended to include at least 10 seconds of behind-the-scenes clips of their product such as DJI Ronin Series or other devices.

*Video submissions should not be longer than three minutes in length.

Submission Details

Submission Start Date: August 15, 2019, 2:00 AM (EST)

Submission End Date: October 14, 2019, 2:00 AM (EST)

Award Announcement: October 31, 2019

Interested participants can visit the 2019 SkyPixel Short Film Contest website for more information on contest rules and guidelines. For more information, contact: Skypixel.campaign@dji.com

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